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Publications

Below you find links to recent scientific publications involving our own staff and staff from our UK partner Saddle Point Science Ltd (UK). We are happy to send pdfs of these publications upon request.

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  • George, G., Rowley, M., Coolen, A., Olalla, A. S., Hammar, N., Feychting, M., Karagiannis, S., Enting, D., & Van Hemelrijck, M. (2025). Advanced risk signature analysis of inflammation markers in predicting prostate cancer using the Swedish Apolipoprotein-related MOrtality RISk (AMORIS) cohort. ESMO Real World Data and Digital Oncology, 8, 100156. https://doi.org/10.1016/j.esmorw.2025.100156

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  • Massa, E., & Coolen, A. C. (2025). Observable asymptotics of regularized Cox regression models with standard gaussian designs : a statistical mechanics approach. Journal of Physics A Mathematical and Theoretical. https://doi.org/10.1088/1751-8121/adb8ad

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  • Fachechi, Alberto & Agliari, Elena & Aquaro, Miriam & Coolen, Anthony & Mulder, Menno. (2025). Fundamental operating regimes, hyper-parameter fine-tuning and glassiness: towards an interpretable replica-theory for trained restricted Boltzmann machines. Journal of Physics A: Mathematical and Theoretical. 58. 10.1088/1751-8121/ada986. ​​

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  • Massa, E., Mozeika, A., & Coolen, A. C. C. (2024). Replica analysis of overfitting in regression models for time to event data: the impact of censoring. Journal Of Physics. A, Mathematical And Theoretical. https://doi.org/10.1088/1751-8121/ad2e40

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  • Beunders, R., Donato, L. J., Van Groenendael, R., Arlt, B., De Souza Carvalho-Wodarz, C., Schulte, J., Coolen, A. C., Lieske, J. C., Meeusen, J. W., Jaffe, A. S., & Pickkers, P. (2023). Assessing GFR with proenkephalin. Kidney International Reports, 8(11), 2345–2355. https://doi.org/10.1016/j.ekir.2023.08.006

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  • Barber, P. R., Mustapha, R., Flores-Borja, F., Alfano, G., Ng, K., Weitsman, G., Dolcetti, L., Mohamed, A., Wong, F., Vicencio, J. M., Galazi, M., Opzoomer, J. W., Arnold, J. N., Thavaraj, S., Kordasti, S., Doyle, J., Greenberg, J., Dillon, M. T., Harrington, K. J., Coolen, A.C.C., Ng, T. (2022). Predicting progression-free survival after systemic therapy in advanced head and neck cancer: Bayesian regression and model development. eLife, 11. https://doi.org/10.7554/elife.73288

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  • Coolen, A. C. C., Nikoletopoulos, T., Arai, S., & Tanaka, K. (2022). Dynamical Analysis of Quantum Annealing. In Sublinear Computation Paradigm (pp. 295–317). Springer, Singapore. https://doi.org/10.1007/978-981-16-4095-7_12

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  • Massa, E., Jonker, M. A., & Coolen, A. C. C. (2022). Penalization-induced shrinking without rotation in high dimensional GLM regression: A cavity analysis. Journal of Physics A: Mathematical and Theoretical, 55(48), 485002. https://doi.org/10.1088/1751-8121/aca4ab

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  • Mura, A., Maier, M., Ballester, B. R., De La Torre Costa, J., López-Luque, J., Gelineau, A., Mandigout, S., Ghatan, P. H., Fiorillo, R., Antenucci, F., Coolen, T., Chivite, Í., Callén, A., Landais, H., Gómez, O. I., Melero, C., Brandi, S., Domènech, M., Daviet, J., . . . Verschure, P. F. M. J. (2022). Bringing rehabilitation home with an e-health platform to treat stroke patients: study protocol of a randomized clinical trial (RGS@Home). Trials, 23(1). https://doi.org/10.1186/s13063-022-06444-0

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  • Davies, Annabel & Coolen, Anthony & Galla, Tobias. (2021). Retarded kernels for longitudinal survival analysis and dynamic prediction. 10.48550/arXiv.2110.11196. 

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  • Abdul-Jawad, S., Baù, L., Alaguthurai, T., Del Molino Del Barrio, I., Laing, A., Hayday, T., Monin, L., Muñoz-Ruiz, M., McDonald, L., Francos-Quijorna, I., McKenzie, D. R., Davis, R. P., Lorenc, A., Chan, J. L., Ryan, S., Bugallo-Blanco, E., Yorke, R., Kamdar, S., Fish, M., Zlatareva,I., Vantourout, P., Jennings, A., Gee, S., Doores, K., Bailey, K., Hazell, S., De Naurois, J., Moss, C., Russell, B., Khan, A.A., ., Benjamin, R., Enting, D., Alrifai, D., Wu, Y., Zhou, Y., Barber, P., Ng,T., Spicer, J., Van Hemelrijck, M., Kumar, M., Vidler,J., Lwin, Y., Fields, P., Karagiannis, S.N., ., Rigg, A., Papa, S., Hayday, A.C. Patten, P.E.M., Irshad, S. (2021). Acute immune signatures and their legacies in severe acute respiratory syndrome coronavirus-2 infected cancer patients. Cancer Cell, 39(2), 257-275.e6. https://doi.org/10.1016/j.ccell.2021.01.001

 

  • Ballester, B. R., Antenucci, F., Maier, M., Coolen, A. C. C., & Verschure, P. F. M. J. (2021). Estimating upper-extremity function from kinematics in stroke patients following goal-oriented computer-based training. Journal of Neuroengineering and Rehabilitation, 18(1). https://doi.org/10.1186/s12984-021-00971-8

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  • Colijn, J. M., Meester-Smoor, M. A., Verzijden, T., De Breuk, A., Silva, R., Merle, B. M. J., Cougnard‐Grégoire, A., Hoyng, C. B., Fauser, S., Coolen, A. C. C., Creuzot‐Garcher, C., Hense, H., Ueffing, M., Delcourt, C., Hollander, A. I. D., & Klaver, C. C. W. (2021). Genetic risk, lifestyle, and age-related macular degeneration in Europe. Ophthalmology, 128(7), 1039–1049. https://doi.org/10.1016/j.ophtha.2020.11.024

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  • Mozeika, A., Sheikh, M., López, F. A., Antenucci, F., & Coolen, A. C. C. (2021). Exact results on high-dimensional linear regression via statistical physics. Physical review, 103(4). https://doi.org/10.1103/physreve.103.042142

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  • Coolen, A. C. C., Sheikh, M., Mozeika, A., López, F. A., & Antenucci, F. (2020). Replica analysis of overfitting in generalized linear regression models. Journal of Physics A, 53(36), 365001. https://doi.org/10.1088/1751-8121/aba028

 

  • Barber, P. R., Weitsman, G., Lawler, K., Barrett, J. E., Rowley, M., Rodríguez-Justo, M., Fisher, D. J., Gao, F., Tullis, I. D. C., Deng, J., Brown, L., Kaplan, R., Hochhauser, D., Adams, R., Maughan, T., Vojnovic, B., Coolen, A. C. C., & Ng, T. (2019). HER2-HER3 heterodimer quantification by FRET-FLIM and patient subclass analysis of the COIN colorectal trial. JNCI: Journal of the National Cancer Institute, 112(9), 944–954. https://doi.org/10.1093/jnci/djz231

 

 

  • Häggström, C., Van Hemelrijck, M., Garmo, H., Robinson, D., Stattin, P., Rowley, M., Coolen, A. C. C., & Holmberg, L. (2018). Heterogeneity in risk of prostate cancer: A Swedish population‐based cohort study of competing risks and Type 2 diabetes mellitus. International Journal of Cancer, 143(8), 1868–1875. https://doi.org/10.1002/ijc.31587

 

  • Grigoriadis, A., Gazinska, P., Pai, T., Irhsad, S., Wu, Y., Millis, R., Naidoo, K., Owen, J., Gillett, C. E., Tutt, A., Coolen, A. C., & Pinder, S. E. (2018). Histological scoring of immune and stromal features in breast and axillary lymph nodes is prognostic for distant metastasis in lymph node-positive breast cancers. The journal of pathology. Clinical research, 4(1), 39–54. https://doi.org/10.1002/cjp2.87

 

  • Coolen, A. C. C., Barrett, J. E., Paga, P., & Perez-Vicente, C. J. (2017). Replica analysis of overfitting in regression models for time-to-event data. Journal of Physics A: Mathematical and Theoretical, 50(37), 375001. https://doi.org/10.1088/1751-8121/aa812f

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